Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs149583087 | chr6:27912437 | G/A | 5.53E-7 | 212 | 16.43 | 15.02 | 9.77 | KM Plot |
KIRP | rs149665610 | chr6:27668465 | TTTTG/T | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
KIRP | rs149706770 | chr1:89496345 | G/A | 1.84E-5 | 210 | 16.43 | 16.47 | 10.72 | KM Plot |
KIRP | rs149747179 | chr15:24504005 | A/G | 0.00045 | 213 | 17 | 14.8 | 9.48 | KM Plot |
KIRP | rs149809700 | chr11:34784749 | A/G | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
KIRP | rs149984157 | chr15:24520541 | TC/T | 0.000239 | 207 | 17.03 | 14.32 | 10.63 | KM Plot |
KIRP | rs150216898 | chr16:20442116 | C/G | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
KIRP | rs150332686 | chr14:59913939 | G/A | 0.000115 | 212 | 16.43 | 17.03 | 6.63 | KM Plot |
KIRP | rs150367452 | chr14:59984129 | T/C | 0.000205 | 213 | 16.43 | 18 | 11.2 | KM Plot |
KIRP | rs150437760 | chr14:59981768 | A/C | 0.000205 | 213 | 16.43 | 18 | 11.2 | KM Plot |
KIRP | rs150497254 | chr11:34973562 | C/T | 0 | 213 | 16.43 | 15.48 | 3.83 | KM Plot |
KIRP | rs150520919 | chr15:24510012 | A/G | 0.000201 | 209 | 17.03 | 14.53 | 10.23 | KM Plot |
KIRP | rs150562420 | chr17:7895497 | C/T | 0.000327 | 211 | 16.43 | 15.33 | 11.2 | KM Plot |
KIRP | rs150564396 | chr15:24763858 | G/A | 7.77E-7 | 210 | 15.2 | 19.27 | 9.77 | KM Plot |
KIRP | rs1507357 | chr1:212925429 | A/C | 0.000234 | 214 | 7.27 | 14.95 | 16.93 | KM Plot |